Autonomous coding agent right in your IDE, capable of creating/editing files, executing commands, and more with your permission every step of the way.

⚡ Supercharge your Perplexity.ai

A self improving AI script to build a Klarna CRM with o1-mini

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

Leveraging LLMs for modernization through intelligent chunking, iterative prompting and reflection, and retrieval augmented generation (RAG).

This project is a server that exposes terminal commands and file editing functionality as an API for ChatGPT Actions. In essence, it allows you to control any machine where you install this with Ch…

A natural language interface for computers

g1: Using Llama-3.1 70b on Groq to create o1-like reasoning chains

The AI Scientist: Towards Fully Automated Open-Ended Scientific Discovery 🧑‍🔬

OpenAGI: When LLM Meets Domain Experts

Substitutable parallelization for C++ libraries

C++ API for various matrix types.

Tools to work with GWAS-VCF summary statistics files

A C++ library for lightning fast multi-threaded serialization of tabular data. Home to the `fst` file format.

DTU analysis tool inspired by llamas

Sex differences in schizophrenia across the caudate nucleus, DLPFC, and hippocampus

Ultra-efficient and sensitive method to search for Open Reading Frames in spliced genomes guided by reference annotation to maximize protein similarity within genes.

interactive plots for differential expression analysis

Visualizing transcript structure and annotation using ggplot2

Short shell/perl/python utils I wrote that I use every day.

Follow file usage of a process

A standalone and lightweight C library

Adaptive semi-global banded alignment on string graphs

Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.

Joe's Window Manager