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sequali Public
Fast sequencing data quality metrics
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python-buffer-methods Public
Fast operations on Python objects supporting the buffer protocol, such as array.array and memoryview.
GNU Affero General Public License v3.0 UpdatedSep 16, 2024 -
cutadapt Public
Forked from marcelm/cutadaptcutadapt removes adapter sequences from sequencing reads
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cpython Public
Forked from python/cpythonThe Python programming language
Python Other UpdatedSep 10, 2024 -
MultiQC Public
Forked from MultiQC/MultiQCAggregate results from bioinformatics analyses across many samples into a single report.
JavaScript GNU General Public License v3.0 UpdatedAug 19, 2024 -
galaxy Public
Forked from galaxyproject/galaxyData intensive science for everyone.
Python Other UpdatedAug 7, 2024 -
dnaio Public
Forked from marcelm/dnaioRead and write FASTQ and FASTA
Python MIT License UpdatedJul 17, 2024 -
isa-l-feedstock Public
Forked from conda-forge/isa-l-feedstockA conda-smithy repository for isa-l.
Shell BSD 3-Clause "New" or "Revised" License UpdatedJul 16, 2024 -
isa-l Public
Forked from intel/isa-lIntelligent Storage Acceleration Library
C BSD 3-Clause "New" or "Revised" License UpdatedJul 15, 2024 -
htslib Public
Forked from samtools/htslibC library for high-throughput sequencing data formats
C Other UpdatedJul 8, 2024 -
test-data Public
Forked from MultiQC/test-dataTest data for MultiQC.
HTML MIT License UpdatedMay 8, 2024 -
pygal Public
Forked from Kozea/pygalPYthon svg GrAph plotting Library
Python GNU Lesser General Public License v3.0 UpdatedApr 22, 2024 -
ansible-galaxy Public
Forked from galaxyproject/ansible-galaxyAn Ansible role for managing a Galaxy server
HTML UpdatedFeb 13, 2024 -
xopen Public
Forked from pycompression/xopenOpen any compressed file in Python
Python MIT License UpdatedFeb 5, 2024 -
midi-organ-project Public
Creating a full foot pedal for a MIDI organ
C++ MIT License UpdatedDec 29, 2023 -
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedNov 10, 2023 -
phred-to-error-rate Public
Convert FASTQ phred scores to probabilities
C MIT License UpdatedSep 5, 2023 -
vcf-compare Public
WDL pipeline for comparing multiple VCF pairs
WDL MIT License UpdatedJul 18, 2023 -
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miniwdl Public
Forked from chanzuckerberg/miniwdlA static analysis toolkit for the Workflow Description Language
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python-isal-feedstock Public
Forked from conda-forge/python-isal-feedstockA conda-smithy repository for python-isal.
BSD 3-Clause "New" or "Revised" License UpdatedMay 1, 2023 -
docker-minimum-base Public
Attempt to build a smalll base for biocontainers using libc,coreutils,bash and busybox
Shell UpdatedMar 10, 2023 -
zlib-ng Public
Forked from zlib-ng/zlib-ngzlib replacement with optimizations for "next generation" systems.
C zlib License UpdatedMar 7, 2023 -
nasm-feedstock Public
Forked from conda-forge/nasm-feedstockA conda-smithy repository for nasm.
Batchfile BSD 3-Clause "New" or "Revised" License UpdatedFeb 15, 2023 -
xopen-feedstock Public
Forked from conda-forge/xopen-feedstockA conda-smithy repository for xopen.
BSD 3-Clause "New" or "Revised" License UpdatedFeb 15, 2023 -
staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedJan 31, 2023 -
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htspy Public
Fast pythonic BAM processing according to the HTS format specifications..
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fastqdedup Public
Alignment-free FASTQ deduplication.