-
Shanghai Jiao Tong University
- Shanghai, China
-
Yeskit Public
Yet another single-cell analysis toolkit
-
awesome-ggplot2 Public
Forked from erikgahner/awesome-ggplot2A curated list of awesome ggplot2 tutorials, packages etc.
UpdatedApr 17, 2024 -
scRepertoire Public
Forked from ncborcherding/scRepertoireA toolkit for single-cell immune profiling
R UpdatedOct 14, 2023 -
TCR-BCR-seq-analysis Public
Forked from crazyhottommy/TCR-BCR-seq-analysisT/B cell receptor sequencing analysis notes
MIT License UpdatedSep 28, 2023 -
PathogenTrack Public
A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.
-
immunarch Public
Forked from immunomind/immunarch🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
R GNU Affero General Public License v3.0 UpdatedAug 21, 2023 -
STARTRAC Public
Forked from Japrin/STARTRACSTARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
HTML GNU General Public License v3.0 UpdatedJul 28, 2023 -
cellranger Public
Forked from rsheets/cellrangerHelper functions to work with spreadsheets and the "A1:D10" style of cell range specification
R Other UpdatedFeb 17, 2023 -
rapids-single-cell-examples Public
Forked from NVIDIA-Genomics-Research/rapids-single-cell-examplesExamples of single-cell genomic analysis accelerated with RAPIDS
Jupyter Notebook Apache License 2.0 UpdatedFeb 14, 2023 -
clusTCR Public
Forked from svalkiers/clusTCRCDR3 clustering module providing a new method for fast and accurate clustering of large data sets of CDR3 amino acid sequences, and offering functionalities for downstream analysis of clustering re…
Python Other UpdatedJan 24, 2023 -
scasa Public
Forked from eudoraleer/scasaSCASA: Single cell transcript quantification tool
R GNU General Public License v3.0 UpdatedJul 1, 2022 -
free-programming-books-zh_CN Public
Forked from justjavac/free-programming-books-zh_CN📚 免费的计算机编程类中文书籍,欢迎投稿
GNU General Public License v3.0 UpdatedMar 22, 2022 -
emg-viral-pipeline Public
Forked from EBI-Metagenomics/emg-viral-pipelineVIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
Python Apache License 2.0 UpdatedFeb 11, 2022 -
AML-CRNDE-Analysis Public
Oncogenic role of lncRNA CRNDE in acute promyelocytic leukemia and NPM1-mutant acute myeloid leukemia
R MIT License UpdatedDec 23, 2021 -
DropletUtils Public
Forked from MarioniLab/DropletUtilsClone of the Bioconductor repository for the DropletUtils package.
R UpdatedOct 3, 2021 -
-
Yeskit.old Public
A Tookit for scRNA data Exploration and Visualization
-
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell UpdatedSep 23, 2021 -
shields Public
Forked from badges/shieldsConcise, consistent, and legible badges in SVG and raster format
JavaScript Creative Commons Zero v1.0 Universal UpdatedSep 19, 2021 -
seqkit Public
Forked from shenwei356/seqkitA cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang
Go MIT License UpdatedSep 18, 2021 -
-
github-profile-views-counter Public
Forked from antonkomarev/github-profile-views-counterIt counts how many times your GitHub profile has been viewed. Free cloud micro-service.
PHP MIT License UpdatedJul 24, 2021 -
Contributions Public
Forked from Bioconductor/ContributionsContribute Packages to Bioconductor
UpdatedJul 12, 2021 -
dyno Public
Forked from dynverse/dynoInferring, interpreting and visualising trajectories using a streamlined set of packages 🦕
R Other UpdatedJun 24, 2021 -
kraken2 Public
Forked from DerrickWood/kraken2The second version of the Kraken taxonomic sequence classification system
C++ MIT License UpdatedMay 16, 2021 -
-
single-cell-rna-seq Public template
Forked from snakemake-workflows/single-cell-rna-seqA single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.
R MIT License UpdatedJan 14, 2021 -
CIRCexplorer2 Public
Forked from YangLab/CIRCexplorer2circular RNA analysis toolset
Python Other UpdatedDec 21, 2020 -
scRNA-seq-workshop Public
Forked from YOU-k/scRNA-seq-workshopsingle cell RNA-seq analysis workshop
Dockerfile UpdatedOct 17, 2020 -
MiddleClick Public
Forked from cl3m/MiddleClickEmulate a middleclick with triple tap on MacBook trackpad and Magic Mouse.
Objective-C GNU General Public License v3.0 UpdatedNov 30, 2018