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Cardiff University
- Cardiff
Highlights
- Pro
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gw Public
Genome browser and variant annotation
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dysgu Public
Toolkit for calling structural variants using short or long reads
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedSep 18, 2024 -
BadreadAmplicon Public
Forked from rrwick/Badreada long read simulator that can imitate many types of read problems
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MINGW-packages Public
Forked from msys2/MINGW-packagesPackage scripts for MinGW-w64 targets to build under MSYS2.
Shell BSD 3-Clause "New" or "Revised" License UpdatedAug 27, 2024 -
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termux-packages Public
Forked from termux/termux-packagesA package build system for Termux.
Shell Other UpdatedJul 15, 2024 -
sortedintersect Public
Fast intersection of sorted reference intervals
Python MIT License UpdatedJun 28, 2024 -
svbench Public
Benchmark structural variant calls against a reference set
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pywfa Public
Python wrapper for wavefront alignment using WFA2-lib
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zights Public
htslib for the zig build system
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SV_benchmark_PacBio_HiFi Public
Structural variant benchmark using PacBio HiFi reads
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SV_Benchmark_CMRG Public
Structural variant benchmark of challenging medically relevant genes
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kmerhash Public
Convert python string to hashed kmers and back again
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WFA2-lib Public
Forked from smarco/WFA2-libWFA2-lib: Wavefront alignment algorithm library v2
C Other UpdatedJun 15, 2023 -
homebrew-core Public
Forked from Homebrew/homebrew-core🍻 Default formulae for the missing package manager for macOS (or Linux)
Ruby BSD 2-Clause "Simplified" License UpdatedJan 31, 2023 -
RemoveCramTags Public
Quickly remove tag(s) from SAM/BAM/CRAM files
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InSilicoSeqSplit Public
Forked from HadrienG/InSilicoSeq🚀 A sequencing simulator
Python MIT License UpdatedFeb 4, 2022 -
rare-disease-wf Public
Forked from brentp/rare-disease-wf(WIP) best-practices workflow for rare disease
Nextflow MIT License UpdatedAug 27, 2021 -
physlr Public
Forked from bcgsc/physlr⛓️ Construct a Physical Map from Linked Reads
Python GNU General Public License v3.0 UpdatedMay 25, 2021 -
fnfi Public
fnfi is a set of tools for aiding split-read alignment and identify structural variants