Neuronal morphology preparation and classification using Machine Learning.

Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis

[MICCAI 2024] CUTS: A Deep Learning and Topological Framework for Multigranular Unsupervised Medical Image Segmentation

The best collection of AI tutorials to make you a boss of Data Science!

Codebase for reproducible benchmarking experiments in MedMNIST v2

This repository reproduces the results in the paper "How expressive are transformers in spectral domain for graphs?"(published in TMLR)

Code for our paper "Attending to Graph Transformers"

Machine learning from scratch

Papers about graph transformers.

Awesome Japan Open Data - 日本のオープンデータ情報一覧・まとめ

Offical repository for Neural Persistence Dynamics

Computations and statistics on manifolds with geometric structures.

A curated collection of resources and research related to the geometry of representations in the brain, deep networks, and beyond

A curated list of topological deep learning (TDL) resources and links.

Code of our NeurIPS 2020 publication 'Uncovering the Topology of Time-Varying fMRI Data using Cubical Persistence'

Code for the paper "Topological Autoencoders" by Michael Moor, Max Horn, Bastian Rieck, and Karsten Borgwardt.

Code for the KDD 2021 paper 'Filtration Curves for Graph Representation'

Patch-free 3D Medical Image Segmentation

Official Code for *Mixed Transformer UNet for Medical Image Segmentation*

PFSeg with multiple improvements

Unofficial PyTorch implementation of Point-Unet: A Context-Aware Point-Based Neural Network for Volumetric Segmentation

Topological Graph Neural Networks (ICLR 2022)

Unsupervised Learning for Image Registration