An implementation of the Grammar of Graphics in R

R toolkit for single cell genomics

📊 A universal enrichment tool for interpreting omics data

Set up commonly used 📦 components

Collection of various algorithms implemented in R.

A grammar of graphics for comparative genomics

➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2

A package to help convert different single-cell data formats to each other

PCAtools: everything Principal Components Analysis

Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)

Reference-guided transcript discovery and quantification for long read RNA-Seq data

DAS Tool

MaAsLin2: Microbiome Multivariate Association with Linear Models

Read, manipulate and visualize 'Pairwise mApping Format' data in R

findGSE is a tool for estimating size of (heterozygous diploid or homozygous) genomes by fitting k-mer frequencies iteratively with a skew normal distribution model.