Move PartitionedArrays support to an extension

.github/workflows/Check.yml

@@ -22,18 +22,37 @@ jobs:
       #   with:
       #     version: '1'
       - uses: julia-actions/cache@v2
-      - uses: julia-actions/julia-buildpkg@v1
+      # - uses: julia-actions/julia-buildpkg@v1
       - name: Install dependencies
-        shell: julia {0}
+        shell: julia --project=@explicit-imports {0}
         run: |
-          # Add ExplicitImports.jl
+          # Add ExplicitImports.jl and packages that HYPRE has extensions for
           using Pkg
-          Pkg.add([PackageSpec(name = "ExplicitImports", version = "1.9")])
+          Pkg.develop([
+              PackageSpec(name = "HYPRE", path = pwd()),
+          ])
+          Pkg.add([
+              PackageSpec(name = "ExplicitImports", version = "1.9"),
+              PackageSpec(name = "PartitionedArrays", version = "0.5"),
+          ])
       - name: ExplicitImports.jl code checks
-        shell: julia --project {0}
+        shell: julia --project=@explicit-imports {0}
         run: |
-          using HYPRE, ExplicitImports
+          using HYPRE, ExplicitImports, PartitionedArrays
+          # Check HYPRE
           check_no_implicit_imports(HYPRE)
           check_no_stale_explicit_imports(HYPRE)
           check_all_qualified_accesses_via_owners(HYPRE)
           check_no_self_qualified_accesses(HYPRE)
+          # Check extension modules
+          for ext in (:HYPREPartitionedArrays,)
+              extmod = Base.get_extension(HYPRE, ext)
+              if extmod !== nothing
+                  check_no_implicit_imports(extmod)
+                  check_no_stale_explicit_imports(extmod)
+                  check_all_qualified_accesses_via_owners(extmod)
+                  check_no_self_qualified_accesses(extmod)
+              else
+                  @warn "$(ext) extension not available."
+              end
+          end

CHANGELOG.md

@@ -9,6 +9,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 ### Changed
  - PartitionedArrays.jl dependency upgraded from release series 0.3.x to release series
    0.5.x. ([#17], [#18])
+ - PartitionedArrays.jl support is now moved to a package extension. ([#23])
  - CEnum.jl dependency upgraded to release series 0.5.x (release series 0.4.x still
    allowed). ([#17], [#18])
 
@@ -90,3 +91,4 @@ Initial release of HYPRE.jl.
 [#16]: https://github.com/fredrikekre/HYPRE.jl/issues/16
 [#17]: https://github.com/fredrikekre/HYPRE.jl/issues/17
 [#18]: https://github.com/fredrikekre/HYPRE.jl/issues/18
+[#23]: https://github.com/fredrikekre/HYPRE.jl/issues/23

Project.toml

@@ -11,6 +11,12 @@ PartitionedArrays = "5a9dfac6-5c52-46f7-8278-5e2210713be9"
 SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
 SparseMatricesCSR = "a0a7dd2c-ebf4-11e9-1f05-cf50bc540ca1"
 
+[weakdeps]
+PartitionedArrays = "5a9dfac6-5c52-46f7-8278-5e2210713be9"
+
+[extensions]
+HYPREPartitionedArrays = "PartitionedArrays"
+
 [compat]
 CEnum = "0.4, 0.5"
 MPI = "0.19, 0.20"
@@ -20,7 +26,8 @@ julia = "1.6"
 
 [extras]
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
+PartitionedArrays = "5a9dfac6-5c52-46f7-8278-5e2210713be9"
 Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 
 [targets]
-test = ["LinearAlgebra", "Test"]
+test = ["LinearAlgebra", "PartitionedArrays", "Test"]

docs/Manifest.toml

@@ -14,38 +14,16 @@ git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c"
 uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c"
 version = "0.4.4"
 
-[[deps.Adapt]]
-deps = ["LinearAlgebra", "Requires"]
-git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24"
-uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"
-version = "3.6.2"
-weakdeps = ["StaticArrays"]
-
-    [deps.Adapt.extensions]
-    AdaptStaticArraysExt = "StaticArrays"
-
 [[deps.ArgTools]]
 uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
 version = "1.1.1"
 
-[[deps.ArrayLayouts]]
-deps = ["FillArrays", "LinearAlgebra", "SparseArrays"]
-git-tree-sha1 = "1d9e98721e71dcf4db5a7d34f55d8aa07c43468f"
-uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a"
-version = "1.0.6"
-
 [[deps.Artifacts]]
 uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
 
 [[deps.Base64]]
 uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
 
-[[deps.BlockArrays]]
-deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"]
-git-tree-sha1 = "bed8cfec0c348753a79d915cc82999c395299297"
-uuid = "8e7c35d0-a365-5155-bbbb-fb81a777f24e"
-version = "0.16.33"
-
 [[deps.CEnum]]
 git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90"
 uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82"
@@ -56,12 +34,6 @@ git-tree-sha1 = "e579c6157598169ad4ef17263bdf3452b4a3e316"
 uuid = "5217a498-cd5d-4ec6-b8c2-9b85a09b6e3e"
 version = "1.1.0"
 
-[[deps.CircularArrays]]
-deps = ["OffsetArrays"]
-git-tree-sha1 = "61bc114e595167090b4cbcb7305ddeacd4274f16"
-uuid = "7a955b69-7140-5f4e-a0ed-f168c5e2e749"
-version = "1.3.2"
-
 [[deps.CodecZlib]]
 deps = ["TranscodingStreams", "Zlib_jll"]
 git-tree-sha1 = "bce6804e5e6044c6daab27bb533d1295e4a2e759"
@@ -77,12 +49,6 @@ version = "1.1.1+0"
 deps = ["Printf"]
 uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"
 
-[[deps.Distances]]
-deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"]
-git-tree-sha1 = "49eba9ad9f7ead780bfb7ee319f962c811c6d3b2"
-uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7"
-version = "0.10.8"
-
 [[deps.Distributed]]
 deps = ["Random", "Serialization", "Sockets"]
 uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"
@@ -113,12 +79,6 @@ version = "2.6.2+0"
 [[deps.FileWatching]]
 uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"
 
-[[deps.FillArrays]]
-deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"]
-git-tree-sha1 = "ed569cb9e7e3590d5ba884da7edc50216aac5811"
-uuid = "1a297f60-69ca-5386-bcde-b61e274b549b"
-version = "1.1.0"
-
 [[deps.Git]]
 deps = ["Git_jll"]
 git-tree-sha1 = "04eff47b1354d702c3a85e8ab23d539bb7d5957e"
@@ -132,11 +92,17 @@ uuid = "f8c6e375-362e-5223-8a59-34ff63f689eb"
 version = "2.46.2+0"
 
 [[deps.HYPRE]]
-deps = ["CEnum", "HYPRE_jll", "Libdl", "MPI", "PartitionedArrays", "SparseArrays", "SparseMatricesCSR"]
+deps = ["CEnum", "HYPRE_jll", "Libdl", "MPI", "SparseArrays", "SparseMatricesCSR"]
 path = ".."
 uuid = "b5ffcf37-a2bd-41ab-a3da-4bd9bc8ad771"
 version = "1.5.0"
 
+    [deps.HYPRE.extensions]
+    HYPREPartitionedArrays = "PartitionedArrays"
+
+    [deps.HYPRE.weakdeps]
+    PartitionedArrays = "5a9dfac6-5c52-46f7-8278-5e2210713be9"
+
 [[deps.HYPRE_jll]]
 deps = ["Artifacts", "JLLWrappers", "LAPACK_jll", "LazyArtifacts", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenBLAS_jll", "OpenMPI_jll", "Pkg", "TOML"]
 git-tree-sha1 = "b77d3eca75f8442e034ccf415c87405a49e77985"
@@ -153,12 +119,6 @@ version = "0.2.3"
 deps = ["Markdown"]
 uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
 
-[[deps.IterativeSolvers]]
-deps = ["LinearAlgebra", "Printf", "Random", "RecipesBase", "SparseArrays"]
-git-tree-sha1 = "1169632f425f79429f245113b775a0e3d121457c"
-uuid = "42fd0dbc-a981-5370-80f2-aaf504508153"
-version = "0.9.2"
-
 [[deps.JLLWrappers]]
 deps = ["Preferences"]
 git-tree-sha1 = "abc9885a7ca2052a736a600f7fa66209f96506e1"
@@ -290,12 +250,6 @@ version = "2023.1.10"
 uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
 version = "1.2.0"
 
-[[deps.OffsetArrays]]
-deps = ["Adapt"]
-git-tree-sha1 = "82d7c9e310fe55aa54996e6f7f94674e2a38fcb4"
-uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881"
-version = "1.12.9"
-
 [[deps.OpenBLAS_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"]
 uuid = "4536629a-c528-5b80-bd46-f80d51c5b363"
@@ -324,12 +278,6 @@ git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c"
 uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
 version = "2.5.10"
 
-[[deps.PartitionedArrays]]
-deps = ["BlockArrays", "CircularArrays", "Distances", "FillArrays", "IterativeSolvers", "LinearAlgebra", "MPI", "Printf", "Random", "SparseArrays", "SparseMatricesCSR", "StaticArrays"]
-git-tree-sha1 = "912e48995e001f7b24d425fb1eebbb97e8c3cb09"
-uuid = "5a9dfac6-5c52-46f7-8278-5e2210713be9"
-version = "0.5.4"
-
 [[deps.Pkg]]
 deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
 uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
@@ -359,12 +307,6 @@ uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"
 deps = ["SHA"]
 uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
 
-[[deps.RecipesBase]]
-deps = ["PrecompileTools"]
-git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff"
-uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01"
-version = "1.3.4"
-
 [[deps.RegistryInstances]]
 deps = ["LazilyInitializedFields", "Pkg", "TOML", "Tar"]
 git-tree-sha1 = "ffd19052caf598b8653b99404058fce14828be51"
@@ -398,36 +340,6 @@ git-tree-sha1 = "38677ca58e80b5cad2382e5a1848f93b054ad28d"
 uuid = "a0a7dd2c-ebf4-11e9-1f05-cf50bc540ca1"
 version = "0.6.7"
 
-[[deps.StaticArrays]]
-deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"]
-git-tree-sha1 = "eeafab08ae20c62c44c8399ccb9354a04b80db50"
-uuid = "90137ffa-7385-5640-81b9-e52037218182"
-version = "1.9.7"
-
-    [deps.StaticArrays.extensions]
-    StaticArraysChainRulesCoreExt = "ChainRulesCore"
-    StaticArraysStatisticsExt = "Statistics"
-
-    [deps.StaticArrays.weakdeps]
-    ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
-    Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
-
-[[deps.StaticArraysCore]]
-git-tree-sha1 = "192954ef1208c7019899fbf8049e717f92959682"
-uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c"
-version = "1.4.3"
-
-[[deps.Statistics]]
-deps = ["LinearAlgebra", "SparseArrays"]
-uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
-version = "1.10.0"
-
-[[deps.StatsAPI]]
-deps = ["LinearAlgebra"]
-git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7"
-uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0"
-version = "1.6.0"
-
 [[deps.SuiteSparse]]
 deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"]
 uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9"