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acwarren committed Mar 12, 2020
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# Celligner_ms
This repo contains code associated with our manuscript describing Celligner, our method for aligning tumor and cell line transcriptional profiles.
This repo contains code associated with the manuscript describing Celligner, our method for aligning tumor and cell line transcriptional profiles.

## Data

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- analysis_helpers.R: Define helper functions used throughout the analysis and creation of figures
- Celligner_helpers.R : Define helper functions used for the Celligner alignment method
- Celligner_methods.R : Functions to run the various stages and entire Celligner alignment method

### Analysis/fig-gen

There are separate scripts for each of the main and supplementary figure panels within the manuscript.
- Celligner_methods.R : Functions to run the various stages and entire Celligner alignment method
- There are separate scripts for each of the main and supplementary figure panels within the manuscript.

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