fixed pep8

examples/merge_example.py

@@ -1,5 +1,5 @@
-# In order to merge to set of schemas, you first need to get the output of the semantic diff comparators
-# You can then pass that result as an input to the merge class.
+# In order to merge to set of schemas, you first need to get the output of the semantic
+# diff comparators. You can then pass that result as an input to the merge class.
 
 
 def merge_sets():

examples/miflowcyt_example.py

@@ -0,0 +1,30 @@
+# The Miflowcyt functionality provide access to the flow repository endpoint.
+# From there it gathers metadata about flow cytometry experiments as XML.
+# It will then transform these XML into a JSON and inject attributes to
+# obtain a final JSON-LD that can be validated against a schema
+
+# To proceed, you must first create a variable that hold the path to a mapping file
+# and your user API key from the config file
+# You also need to import the FlowRepoClient class from the miflowcyt_validate file of the
+# the validate module
+import os
+import json
+from validate.miflowcyt_validate import FlowRepoClient
+
+# Get the path to the mapping file
+map_file = os.path.join(os.path.dirname(__file__),
+                        "../tests/data/MiFlowCyt/experiment_mapping.json")
+
+base_schema = "experiment_schema.json"  # Get the name of the schema
+
+# Load your API KEY from the config.json file
+configfile_path = os.path.join(os.path.dirname(__file__), "../tests/test_config.json")
+with open(configfile_path) as config_data_file:
+    config_json = json.load(config_data_file)
+    config_data_file.close()
+apiKey = config_json["flowrepo_userID"]
+items = 1  # Initialize the number of instances to gather from the API
+
+client = FlowRepoClient(map_file, apiKey, items)  # initialize the class
+instances = client.inject_context()  # inject the attributes to obtain a JSON-LD
+print(json.dumps(instances, indent=4))  # Enjoy

examples/semDiff_example.py

@@ -3,8 +3,8 @@
 
 
 # First case scenario, your networks are not resolved
-# You will need to provide a dictionary of regex term/switch that will help translate the schemas IDs
-# into contexts IDs
+# You will need to provide a dictionary of regex term/switch that will help
+# translate the schemas IDs into contexts IDs
 def compare_unresolved_network():
 
     # import the corresponding class