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Insights: MIC-DKFZ/nnUNet
September 12, 2024 – September 19, 2024
Overview
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1 Pull request merged by 1 person
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Fix NibabelIOWithReorient saver function
#2478 merged
Sep 17, 2024
1 Pull request opened by 1 person
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Add a toy example for `nnunetv2.utilities.get_network_from_plans`
#2508 opened
Sep 19, 2024
8 Issues closed by 5 people
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nnUNet with CUDA 11.8
#2506 closed
Sep 18, 2024 -
Error training on docker container with python 3.7
#2505 closed
Sep 18, 2024 -
nnUnet with CUDA Driver 10.1
#2487 closed
Sep 18, 2024 -
Unpacking dataset...
#2481 closed
Sep 18, 2024 -
autoPET II inference
#2471 closed
Sep 17, 2024 -
output training results
#2274 closed
Sep 17, 2024 -
Epoch time in training double that of benchmarking
#2469 closed
Sep 16, 2024
9 Issues opened by 9 people
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Tiled inference (for large images)
#2510 opened
Sep 19, 2024 -
Runtime Error running nnUNetv2_plan_and_preprocess (multiprocessing)
#2509 opened
Sep 19, 2024 -
Error message after replacing PlainConvUNet
#2507 opened
Sep 19, 2024 -
nnunet inference speed up
#2504 opened
Sep 16, 2024 -
Preprocessing and Installation - setuptools, cannot import name find_namespace_packages
#2503 opened
Sep 16, 2024 -
Could not find requested nnunet trainer nnUNetTrainerUMambaBot in nnunetv2.training.nnUNetTrainer
#2501 opened
Sep 16, 2024 -
free(): invalid pointer
#2500 opened
Sep 15, 2024 -
Extracting u-net algorithm from nnunet pipeline
#2498 opened
Sep 14, 2024 -
Question about run inference with pretrained model in V2
#2497 opened
Sep 13, 2024
9 Unresolved conversations
Sometimes conversations happen on old items that aren’t yet closed. Here is a list of all the Issues and Pull Requests with unresolved conversations.
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Ensembling across different trainers for a dataset.
#2493 commented on
Sep 13, 2024 • 0 new comments -
Tumors detected but the segmentation area is way smaller than it should be
#2492 commented on
Sep 17, 2024 • 0 new comments -
NibabelIOWithReorient saves outputs with wrong orientation in special cases
#2477 commented on
Sep 17, 2024 • 0 new comments -
Saving one of the models as a torchscript file
#2088 commented on
Sep 17, 2024 • 0 new comments -
Request: Official Docker image
#2373 commented on
Sep 17, 2024 • 0 new comments -
nnUNetv2_plan_and_preprocess : IndexError
#2485 commented on
Sep 17, 2024 • 0 new comments -
Would like to save each label as a separate .nii.gz file during the inference phase?
#2491 commented on
Sep 18, 2024 • 0 new comments -
The training and validation loss dropped to -0.6, and it stopped dropping
#1271 commented on
Sep 18, 2024 • 0 new comments -
About the model FLOPs and Parameters
#2495 commented on
Sep 19, 2024 • 0 new comments