Transform B-factor to RMSD
Python3
CCP4i Superpose must be added $PATH
Python3 /../RMSD_Transform-1.0.0/setup.py install
chmod u+x TransformRMSD
TransformRMSD should be added $PATH
Divided into four modules
alignment
getrmsd
changepdb
bfactor_to_rmsd
TransformRMSD alignment -h :for help
TransformRMSD bfactor_to_rmsd -d default.pdb -f rmsd.pdb -u unchanged_pdb -l result.log -j rmsd_json :You can get the pdb file changed to rmsd in rmsd.pdb, for other parameters please use -h for details
If a bug occurs during use, please contact me at [email protected] without hesitation. ---Lid