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  1. DnaFeaturesViewer DnaFeaturesViewer Public

    šŸ‘ļø Python library to plot DNA sequence features (e.g. from Genbank files)

    Python 587 91

  2. DnaChisel DnaChisel Public

    āœļø A versatile DNA sequence optimizer

    Python 219 40

  3. DnaWeaver DnaWeaver Public

    A route planner for DNA assembly

    Python 29 9

  4. DnaCauldron DnaCauldron Public

    āš—ļø Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies

    Python 50 11

  5. BandWitch BandWitch Public

    šŸ’« Computer-aided DNA assembly validation and identification from restriction digests.

    Python 15

  6. Sequeduct Sequeduct Public

    Sequencing analysis pipeline

    Nextflow 12

Repositories

Showing 10 of 71 repositories
  • Plateo Public

    šŸ¤– Python biolab automation library: parsers, report generators, picklist simulators, and more

    Edinburgh-Genome-Foundry/Plateoā€™s past year of commit activity
    Python 41 MIT 7 1 0 Updated Oct 3, 2024
  • Sequeduct Public

    Sequencing analysis pipeline

    Edinburgh-Genome-Foundry/Sequeductā€™s past year of commit activity
    Nextflow 12 GPL-3.0 0 1 0 Updated Oct 3, 2024
  • Examples Public

    Collection of Python modules and Jupyter notebook examples

    Edinburgh-Genome-Foundry/Examplesā€™s past year of commit activity
    HTML 6 MIT 2 0 0 Updated Sep 5, 2024
  • DnaChisel Public

    āœļø A versatile DNA sequence optimizer

    Edinburgh-Genome-Foundry/DnaChiselā€™s past year of commit activity
    Python 219 MIT 40 12 1 Updated Aug 29, 2024
  • DnaFeaturesViewer Public

    šŸ‘ļø Python library to plot DNA sequence features (e.g. from Genbank files)

    Edinburgh-Genome-Foundry/DnaFeaturesViewerā€™s past year of commit activity
    Python 587 MIT 91 34 3 Updated Aug 19, 2024
  • Mutator Public
    Edinburgh-Genome-Foundry/Mutatorā€™s past year of commit activity
    Python 1 MIT 0 0 0 Updated Aug 13, 2024
  • SnapGeneReader Public Forked from IsaacLuo/SnapGeneFileReader

    šŸ‘“ Python library to parse Snapgene *.dna files to dict or biopython seqrecord.

    Edinburgh-Genome-Foundry/SnapGeneReaderā€™s past year of commit activity
    Python 18 MIT 14 0 0 Updated Aug 2, 2024
  • EpiJinn Public

    DNA methylation and restriction

    Edinburgh-Genome-Foundry/EpiJinnā€™s past year of commit activity
    Python 1 GPL-3.0 0 0 0 Updated Jul 11, 2024
  • Seq_Report Public

    Simple reporting on a set of sequences for documentation purposes

    Edinburgh-Genome-Foundry/Seq_Reportā€™s past year of commit activity
    Python 1 MIT 0 0 0 Updated Apr 25, 2024
  • pdf_reports Public

    šŸ“• Python library and CSS theme to generate PDF reports from HTML/Pug

    Edinburgh-Genome-Foundry/pdf_reportsā€™s past year of commit activity
    Python 223 MIT 39 10 0 Updated Apr 18, 2024