-
-
atlas Public
Forked from metagenome-atlas/atlasATLAS - Three commands to start analyzing your metagenome data
Python BSD 3-Clause "New" or "Revised" License UpdatedFeb 16, 2023 -
ECON Public
Forked from YuliangXiu/ECONECON: Explicit Clothed humans Obtained from Normals
Python Other UpdatedDec 22, 2022 -
bioinformatics_curriculum Public
Forked from ctmrbio/bioinformatics_curriculumSome ideas on things to learn to get started with bioinformatics
MIT License UpdatedDec 1, 2022 -
-
singularity_playground Public
This repo maintains the definition files used for building singularity images remotely. Each branch maintains a different environment.
1 UpdatedMay 13, 2022 -
anki-csv-importer Public
Forked from gsingh93/anki-csv-importerImport local or remote CSV files into Anki from the command line
Python MIT License UpdatedSep 15, 2021 -
StaG-SIS Public
Singularity in Singularity container for StaG metagenomic workflow
Shell UpdatedAug 11, 2020 -
stag-mwc Public
Forked from ctmrbio/stag-mwcStaG Metagenomic Workflow Collaboration
Python MIT License UpdatedAug 10, 2020 -
amrplusplus_v2 Public
Forked from meglab-metagenomics/amrplusplus_v2MEGARes and AmrPlusPlus - A comprehensive database of antimicrobial resistance genes and user-friendly pipeline for analysis of high-throughput sequencing data
Groovy MIT License UpdatedJul 31, 2020 -
Abrigahit Public
Snakefile for assembly of metagenomes with Megahit and resistome profiling with Abricate
-
RGI Public
Snakefile to run Resistance Gene Identifier (RGI) on extracted SNPs from AMRPlusPlus v2.0.
Python UpdatedMar 26, 2020 -
Ublastx_stageone Public
Forked from biofuture/Ublastx_stageoneThis is the source code for multisamples ARGs profiling using SARG2.0 database
HTML UpdatedMar 8, 2020 -
Snakefile to run ShortBred using Singularity container
Python UpdatedMar 5, 2020 -
bioinformatic-nextflow-pipelines Public
Forked from EnriqueDoster/bioinformatic-nextflow-pipelinesCollection of bioinformatic pipelines written in nextflow
Groovy MIT License UpdatedFeb 18, 2020 -
Biochem-3BP3 Public
Forked from raphenya/Biochem-3BP3Lectures and Lab Exercises for Biochem 3BP3 Practical Bioinformatics for the Genomics Era
GNU General Public License v3.0 UpdatedOct 23, 2019 -
-
-