Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

A delightful community-driven framework for managing your bash configuration, and an auto-update tool so that makes it easy to keep up with the latest updates from the community.

Multiview Compressive Coding for 3D Reconstruction

Assembly and binning of metagenomes

[CVPR'23, Highlight] ECON: Explicit Clothed humans Optimized via Normal integration

[CVPR'22] ICON: Implicit Clothed humans Obtained from Normals

High-Resolution 3D Human Digitization from A Single Image.

AMR++ is a bioinformatic pipeline meant to aid in the analysis of raw sequencing reads to characterize the profile of antimicrobial resistance genes, or resistome.

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

Python implementations of the k-modes and k-prototypes clustering algorithms, for clustering categorical data

Documentation for GitHub Copilot

Collection of bioinformatics training materials

Github Wiki sidebar menu builder with multi-level, ordering and exclusion list support

StaG Metagenomic Workflow Collaboration

microbiome R package

An Introduction to Applied Bioinformatics, 2nd Edition

RStudio add-in to make plots interactively with ggplot2

Orchestrating Microbiome Analysis

Multi-language Jupyter Notebook

Metagenomics calibration R package

A list of interesting genome browser or genome-browser-like implementations

Interactive lessons in bioinformatics.

MEGARes and AmrPlusPlus - A comprehensive database of antimicrobial resistance genes and user-friendly pipeline for analysis of high-throughput sequencing data

REference Sequence annotation and CuRatIon Pipeline

Singularity env for analysis on the Bianca cluster

Ley Lab MetaGenome Profiler DataBase generator

The new Windows Terminal and the original Windows console host, all in the same place!

Cookiecutter for snakemake slurm profile