The Big List of Naughty Strings is a list of strings which have a high probability of causing issues when used as user-input data.

🥧 HTTPie CLI — modern, user-friendly command-line HTTP client for the API era. JSON support, colors, sessions, downloads, plugins & more.

The fundamental package for scientific computing with Python.

Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.

Python composable command line interface toolkit

scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

Interactive lessons in bioinformatics.

Official repository for the QIIME 2 framework.

The Biological Observation Matrix (BIOM) Format Project

SourceTracker2

A speedreader inspired by Spritz and Optimal Recognition Point

Greengenes workflow tools and utilities

conda recipes for bioinformatic tools like blast+, infernal, etc.