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Karolinska Institutet
- Stockholm, Sweden
- tsik.me
- @NTsiknakis
Highlights
- Pro
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pathology-snippets Public
Forked from choosehappy/SnippetsPieces of code likely to be useful as part of larger projects
Python MIT License UpdatedNov 10, 2021 -
pathology-he-auto-augment Public
Forked from DIAGNijmegen/pathology-he-auto-augmentH&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
Python UpdatedNov 4, 2021 -
neural-image-compression Public
Forked from davidtellez/neural-image-compressionCode accompanying the paper Neural Image Compression for Gigapixel Histopathology Image Analysis
Python MIT License UpdatedNov 2, 2021 -
You-Dont-Need-GUI Public
Forked from you-dont-need/You-Dont-Need-GUIStop relying on GUI; CLI **ROCKS**
UpdatedOct 20, 2021 -
awesome-git-addons Public
Forked from stevemao/awesome-git-addons😎 A curated list of add-ons that extend/enhance the git CLI.
UpdatedOct 2, 2021 -
SpatialScore Public
Forked from nolanlab/SpatialScoreR script for calculating the SpatialScore as described in our manuscript: "Immune cell topography predicts response to PD-1 blockade in cutaneous T cell lymphoma".
R UpdatedSep 26, 2021 -
Neural-Network-Architecture-Diagrams Public
Forked from kennethleungty/Neural-Network-Architecture-DiagramsDiagrams for visualizing neural network architecture (Created with diagrams.net)
MIT License UpdatedSep 8, 2021 -
periNuclearHE Public
Forked from maberyick/periNuclearHESet of features extracted from Whole Slide images (WSI) patches, related to the perimetral tissue region surrounding individual tumor cells, as well as the cell morphometrics.
MATLAB MIT License UpdatedMay 19, 2021 -
cellFeaturesHE Public
Forked from maberyick/cellFeaturesHECell features from HE-stained images regarding nuclei shape, texture and such.
MATLAB MIT License UpdatedMay 19, 2021 -
TumorSegmentationHE_UNET Public
Forked from maberyick/TumorSegmentationHE_UNETTumor segmentation on H&E-stained images based on UNET
Python MIT License UpdatedMay 11, 2021 -
nucleiSegmentationHEDL Public
Forked from maberyick/nucleiSegmentationHEDLNuclei segmentation performed on the digitized H&E-stained images of whole slide images (WSI). It is a deep learning model (DL) based on a GAN architecture.
Python MIT License UpdatedMay 3, 2021 -
Unet-with-Pretrained-Encoder Public
Forked from nikhilroxtomar/Unet-with-Pretrained-EncoderThe repository contains the Jupyter Notebook that perform semantic segmentation using the famous U-Net. The encoder of the U-Net is replaced with the pretrained encoder.
Jupyter Notebook UpdatedMay 1, 2021 -
StreamingCNN Public
Forked from DIAGNijmegen/StreamingCNNTo train deep convolutional neural networks, the input data and the activations need to be kept in memory. Given the limited memory available in current GPUs, this limits the maximum dimensions of …
Jupyter Notebook MIT License UpdatedMar 19, 2021 -
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ESPNetv2 Public
Forked from sacmehta/ESPNetv2A light-weight, power efficient, and general purpose convolutional neural network
Python MIT License UpdatedJan 29, 2021 -
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feature-selection-for-machine-learning Public
Forked from ttungl/feature-selection-for-machine-learningJupyter Notebook UpdatedSep 23, 2020 -
sun-card Public
Forked from mishaaq/sun-cardLovelace card for sun component - Home Assistant
TypeScript MIT License UpdatedJun 3, 2020 -
covid19-xray-cnn Public
A CNN model for predicting COVID19 from X-ray chest images.
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dr-classification Public
Diabetic retinopathy classification network
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Keras-Project-Template Public
Forked from Ahmkel/Keras-Project-TemplateA project template to simplify building and training deep learning models using Keras.
Python Apache License 2.0 UpdatedDec 10, 2019 -
create-a-hdf5-data-set-for-deep-learning Public
Forked from feiyuhuahuo/create-a-hdf5-data-set-for-deep-learningcreate your own data set with python library h5py and a simple example for image recognition
Python UpdatedNov 22, 2019 -
keras-project-template-distributed Public
Forked from v6x/keras-project-templateA project template to start writing deep learning models using Keras.
Python UpdatedSep 3, 2019 -
e-secretary Public archive
E-Secretary is a naive solution for a university's secretary website, developed as a semester project in the Web Programming Course in ECE UPatras
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ece-upatras-thesis-template Public
A LaTeX thesis template for ECE Dep., University of Patras.
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Additive-Margin-Softmax Public
Forked from Joker316701882/Additive-Margin-SoftmaxThis is the implementation of paper <Additive Margin Softmax for Face Verification>
Jupyter Notebook UpdatedAug 29, 2018 -
phd-thesis Public
Forked from anddis/phd-thesisFiles to typeset my doctoral thesis (Karolinska Institutet)
TeX MIT License UpdatedOct 11, 2017