Commits

Commits on Aug 5, 2021

Upgrade Spark dependency from 3.0.0 to 3.1.2 (#396 )
karenfeng
committedAug 5, 2021

Commits on Jun 3, 2021

Test changed notebooks in branches (#380 )
karenfeng
committedJun 3, 2021

Commits on Jun 1, 2021

Create integration test script (#373 )
karenfeng
committedJun 1, 2021

Commits on Apr 27, 2021

Update Python version
karenfeng
committedApr 27, 2021
Setting version to 1.0.2-SNAPSHOT
karenfeng
committedApr 27, 2021

Commits on Apr 24, 2021

Migrate from Bintray to Sonatype (#367 )
karenfeng
committedApr 24, 2021

Commits on Feb 9, 2021

Release v1.0.0 (#345 )
karenfeng
committedFeb 9, 2021

Commits on Feb 8, 2021

Do not yapf build/lib/glow/functions.py (#344 )
karenfeng
committedFeb 8, 2021

Commits on Feb 5, 2021

Fix broken validation (#343 )
karenfeng
committedFeb 5, 2021

Commits on Feb 3, 2021

Perform Hail tests separately during release (#341 )
karenfeng
committedFeb 3, 2021

Commits on Feb 2, 2021

Bump pandas/numpy/pyarrow versions (#339 )
karenfeng
committedFeb 2, 2021

Commits on Jan 29, 2021

Remove references to Genomics Runtime (#335 )
karenfeng
committedJan 29, 2021
Clarify ref/alt allele in PLINK (#336 )
karenfeng
committedJan 29, 2021

Commits on Jan 28, 2021

Prepare phenotypes (#328 )

karenfeng
and
henrydavidge
committedJan 28, 2021

Commits on Jan 20, 2021

GWAS doc improvements (#324 )
karenfeng
committedJan 20, 2021

Commits on Jan 13, 2021

Approximate Firth correction (#318 )

karenfeng
and
henrydavidge
committedJan 13, 2021

Commits on Dec 21, 2020

Address edge case with tabix offsets and partitioned files (#317 )
karenfeng
committedDec 21, 2020

Commits on Dec 2, 2020

Ignore covariates in binary WGR transform for linear response (#311 )
karenfeng
committedDec 2, 2020

Commits on Dec 1, 2020

Create conda environment for docs (#313 )
karenfeng
committedDec 1, 2020

Commits on Nov 25, 2020

Add documentation for Hail interoperation (#310 )
karenfeng
committedNov 25, 2020

Commits on Nov 20, 2020

Revert "Clone Hail in conda env"
karenfeng
committedNov 20, 2020
Merge branch 'master' of https://github.com/projectglow/glow
karenfeng
committedNov 20, 2020
Clone Hail in conda env
karenfeng
committedNov 20, 2020

Commits on Nov 17, 2020

Document BGEN/PLINK allele order (#305 )
karenfeng
committedNov 17, 2020

Commits on Nov 13, 2020

Update badge to reflect Spark3 version of Glow (#306 )
karenfeng
committedNov 13, 2020

Commits on Nov 11, 2020

Create BGEN reader option to add hard calls (#303 )
karenfeng
committedNov 11, 2020
Conversion from Hail MatrixTable to Glow DataFrame (#300 )
karenfeng
committedNov 11, 2020

Commits on Nov 2, 2020

Generate notebook sources (#301 )
karenfeng
committedNov 2, 2020

Commits on Sep 22, 2020

GloWGR scaling improvements (#282 )
karenfeng
committedSep 22, 2020
Update docs for Spark 3/Scala 2.12 (#286 )
karenfeng
committedSep 22, 2020

Commits on Sep 9, 2020

Fix BgenRowConverterSuite with AQE enabled (#292 )
karenfeng
committedSep 9, 2020

Commits on Aug 21, 2020

Update sybil due to PyTest deprecation warnings (#284 )
karenfeng
committedAug 21, 2020

Commits on Aug 20, 2020

Generate alphas with label-free headers (#281 )
karenfeng
committedAug 20, 2020

Commits on Aug 13, 2020

Document mean imputation for covariates and phenotypes (#279 )
karenfeng
committedAug 13, 2020

Commits on Aug 10, 2020

Standardize on unbiased standard deviation (#271 )
karenfeng
committedAug 10, 2020