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karenfeng

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Commits on Aug 10, 2020

• Document validation stringency (#275)

  karenfeng

  committedAug 10, 2020
  5f9dbf4

Commits on Jul 28, 2020

• fix cluster-lib link (#265)

  karenfeng

  committedJul 28, 2020
  bbecad3

Commits on Jul 27, 2020

• Use SQL context from input DataFrame in transformer (#259)

  karenfeng

  committedJul 27, 2020
  8e9eee5

Commits on Jul 22, 2020

• Default build to Spark 3.0.0 (#254)

  karenfeng

  committedJul 22, 2020
  c8b41ee

Commits on Jul 20, 2020

• Fix linkcheck errors (#253)

  karenfeng

  committedJul 20, 2020
  ce6b029

Commits on Jul 17, 2020

• Pass new Hadoop configuration in BigFileDatasource (#248)

  karenfeng

  committedJul 17, 2020
  0fa3c04

Commits on Jul 16, 2020

• Document community edition setup (#250)

  karenfeng

  committedJul 16, 2020
  8c92d2e

Commits on Jul 2, 2020

• Add tests that regex's tolerate chromosomes with underscores (#244)

  karenfeng

  committedJul 2, 2020
  cdc8efc

Commits on Jul 1, 2020

• Create LOCO transformation function for RidgeRegression (#242)

  karenfeng

  committedJul 1, 2020
  7c47a68

Commits on Jun 26, 2020

• Perform GloWGR input validation (#240)

  karenfeng

  committedJun 26, 2020
  232f02d

Commits on Jun 23, 2020

• Post GloWGR blog (#238)

  karenfeng

  committedJun 23, 2020
  9ef0a18

• Documentation for WGR (#235)

  

  5 peoplecommittedJun 23, 2020
  e0680a7

Commits on Jun 8, 2020

• Improve GWAS documentation (#217)

  karenfeng

  committedJun 8, 2020
  22f1a90

Commits on Jun 2, 2020

• Fix IntelliJ import (#223)

  

  karenfeng

  and

  kianfar77

  committedJun 2, 2020
  7548aa8

Commits on May 29, 2020

• Support numpy literals (#213)

  karenfeng

  committedMay 29, 2020
  66d554e

Commits on May 27, 2020

• Add yapf to format Python files (#220)

  karenfeng

  committedMay 27, 2020
  b8d3f87

Commits on May 19, 2020

• Revert "Use full ExpressionInfo constructor (#209)" (#214)

  karenfeng

  committedMay 19, 2020
  14e42ec

Commits on May 18, 2020

• Fix mean substitution lambda variable usage (#211)

  

  karenfeng

  and

  henrydavidge

  committedMay 18, 2020
  ed6097b

Commits on May 14, 2020

• Create mean substitution function (#207)

  karenfeng

  committedMay 14, 2020
  4661ef4

• Use full ExpressionInfo constructor (#209)

  karenfeng

  committedMay 14, 2020
  6bf8435

• Fix PLINK documentation (#210)

  karenfeng

  committedMay 14, 2020
  23dbc32

Commits on May 11, 2020

• Remove ExpressionEncoder (#206)

  karenfeng

  committedMay 11, 2020
  3363d3c

Commits on Apr 30, 2020

• Fix Spark 3 CI (#198)

  karenfeng

  committedApr 30, 2020
  75059c0

Commits on Apr 27, 2020

• Upgrade GATK dependency to 4.1.6.0 (#185)

  karenfeng

  committedApr 27, 2020
  c092607

Commits on Apr 14, 2020

• Do not read contig and filter header lines on VCF ingest (#189)

  karenfeng

  committedApr 14, 2020
  505cbf7

Commits on Apr 13, 2020

• Ignore tabix index files when reading VCFs (#186)

  karenfeng

  committedApr 13, 2020
  28b8068

• Cache conda env for Spark 3 (#188)

  karenfeng

  committedApr 13, 2020
  bab5c36

• Address link check failures (#187)

  karenfeng

  committedApr 13, 2020
  bdd7694

Commits on Apr 7, 2020

• Run nightly tests against Spark 3 (#181)

  karenfeng

  committedApr 7, 2020
  0467ef3

Commits on Mar 31, 2020

• Do not pipe empty RDD partitions (#180)

  karenfeng

  committedMar 31, 2020
  75ee93c

Commits on Mar 27, 2020

• Use stat.ethz.ch R manual instead of rdocumentation (#178)

  karenfeng

  committedMar 27, 2020
  b7819cc

Commits on Mar 23, 2020

• make single file writer public (#175)

  karenfeng

  committedMar 23, 2020
  29e4869

Commits on Mar 20, 2020

• Close writer even if stream closes first (#174)

  karenfeng

  committedMar 20, 2020
  5550a42

• Read contig and filter lines (#173)

  karenfeng

  committedMar 20, 2020
  5291b90

Commits on Mar 12, 2020

• Move QuaternaryExpression to Spark shim (#170)

  karenfeng

  committedMar 12, 2020
  444b50e

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