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Python package for compositional data analysis

Python 12 1 Updated Dec 1, 2023

compositional data analysis toolbox

Jupyter Notebook 55 28 Updated Dec 15, 2022

scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

Python 880 267 Updated Sep 20, 2024

Community-curated tutorials and datasets for ML in proteomics

Jupyter Notebook 44 7 Updated Jun 6, 2024

The codebase of the OpenMS project

C++ 477 316 Updated Sep 21, 2024

Pyzotero: a Python client for the Zotero API

Python 873 96 Updated Sep 14, 2024

python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.

Python 26 10 Updated Feb 1, 2024

A Python framework for structural systems biology

Python 103 28 Updated Dec 7, 2020

A comprehensive library for computational molecular biology

Python 614 99 Updated Sep 16, 2024

Access to Biological Web Services from Python.

Python 278 61 Updated Jul 15, 2024

Draw UpSet plots with Matplotlib

Python 321 62 Updated May 2, 2024

得意黑 Smiley Sans:一款在人文观感和几何特征中寻找平衡的中文黑体

HTML 13,006 367 Updated Mar 16, 2024

Python package built to ease deep learning on graph, on top of existing DL frameworks.

Python 13,374 3,002 Updated Sep 19, 2024

A collection of important graph embedding, classification and representation learning papers with implementations.

Python 4,730 742 Updated Mar 18, 2023

Graph Algorithms

Python 600 67 Updated Sep 19, 2024

Visualization of popular algorithms using NetworkX Graph libray

Python 204 125 Updated Sep 3, 2021

Karate Club: An API Oriented Open-source Python Framework for Unsupervised Learning on Graphs (CIKM 2020)

Python 2,136 244 Updated Jul 17, 2024

A Python Library for Outlier and Anomaly Detection, Integrating Classical and Deep Learning Techniques

Python 8,454 1,360 Updated Sep 6, 2024

Paperdl: Search and download paper from specific websites.

Python 39 7 Updated Jul 20, 2022

📚 Biomedical knowledge mining using GOSemSim and clusterProfiler

TeX 69 27 Updated Jun 19, 2023

Source for the PyViz.org website.

Python 151 50 Updated Sep 16, 2024

add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.

Python 643 72 Updated Jul 31, 2024

FastAPI-Amis-Admin is a high-performance, efficient and easily extensible FastAPI admin framework. Inspired by django-admin, and has as many powerful functions as django-admin.

Python 1,039 153 Updated Aug 18, 2024

Python wrapper for the arXiv API

Python 1,074 120 Updated Jun 26, 2024

PubMed Mapper: A Python library that map PubMed XML to Python object

Python 41 8 Updated Mar 23, 2023

📋 A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset

Python 577 164 Updated Sep 4, 2024

A python module that could analysis the ERGs

Jupyter Notebook 5 3 Updated Jul 7, 2021

Open-source scientific and technical publishing system built on Pandoc.

JavaScript 3,769 309 Updated Sep 20, 2024

MM-Wiki 一个轻量级的企业知识分享与团队协同软件,可用于快速构建企业 Wiki 和团队知识分享平台。部署方便,使用简单,帮助团队构建一个信息共享、文档管理的协作环境。

Go 3,538 832 Updated Jul 26, 2024

A functional standard library for Python.

Python 4,648 258 Updated Jun 15, 2024
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