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Commits on Oct 24, 2017

• Bug fix for parsing gene names from GTF

  francois-a

  committedOct 24, 2017
  ccf1845

Commits on Aug 18, 2017

• Bug fix for qvalue 'lambda' input

  francois-a

  committedAug 18, 2017
  fd21f3c

• Chunks distributed more evenly; added option to set 'lambda' for qvalue/pi0est

  francois-a

  committedAug 18, 2017
  a643c07

Commits on Aug 13, 2017

• Wrappers for running and merging chunks

  francois-a

  committedAug 13, 2017
  b9f7395

Commits on Jul 31, 2017

• Added minor allele frequency and counts to outputs

  francois-a

  committedJul 31, 2017
  5ff01cf

Commits on Feb 21, 2017

• Updated help

  francois-a

  committedFeb 21, 2017
  31c4741

Commits on Jan 14, 2017

• Reduced memory usage; variant lookup table now optional

  francois-a

  committedJan 14, 2017
  80eb2f5

Commits on Nov 19, 2016

• Added option to filter by AF value in INFO field (--global-af-threshold)

  francois-a

  committedNov 19, 2016
  a7be681

Commits on Nov 13, 2016

• Added option to report best variant only in nominal mode

  francois-a

  committedNov 13, 2016
  9395e1c

Commits on Jun 20, 2016

• Added 'exclude-samples' option

  francois-a

  committedJun 20, 2016
  df03af3

Commits on Jun 10, 2016

• Minor fix

  francois-a

  committedJun 10, 2016
  01ea5ad

• Bug fix: removed hardcoded test input

  francois-a

  committedJun 10, 2016
  9cdf7a6

Commits on Jun 9, 2016

• Script for sorting pairs by variant

  francois-a

  committedJun 9, 2016
  2cc9b60

• Added output_dir option

  francois-a

  committedJun 9, 2016
  409e1ca

Commits on Jun 8, 2016

• Fixed header insertion

  francois-a

  committedJun 8, 2016
  be345d9

Commits on Jun 6, 2016

• Script for annotating egene results, and for generating list of

  francois-a

  committedJun 6, 2016
  cab36a9

Commits on Jun 5, 2016

• Deleting original post-processing script

  francois-a

  committedJun 5, 2016
  9c5a254

• Added minor allele information (maf, ma count, ma sample count, ref. factor) to permutation output

  francois-a

  committedJun 5, 2016
  31eab27

• Updated static binary

  francois-a

  committedJun 5, 2016
  6c8d224

• Adding scripts, readme

  francois-a

  committedJun 5, 2016
  b9228b3

Commits on Jun 4, 2016

• Changed chunk sorting to preserve order

  francois-a

  committedJun 4, 2016
  a8b9bd1

Commits on May 26, 2016

• Added minor allele frequency and count filters

  francois-a

  committedMay 26, 2016
  1d2b9e8

Commits on Apr 8, 2016

• Changed outputs to tab-delimited; added regression slope s.e. to output; strip spaces from sample IDs

  francois-a

  committedApr 8, 2016
  1e77cdb

Commits on Mar 21, 2016

• Initial commit of FastQTL v2.184 from http://fastqtl.sourceforge.net

  francois-a

  committedMar 21, 2016
  de0e901