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Commits on Mar 11, 2024

• feat: omit wrapper creation for guppy

  marrip

  committedMar 11, 2024
  413ed82

• docs: update docs

  marrip

  committedMar 11, 2024
  af32f2e

• feat: rm spades Dockerfile and use latest biocontainer version

  marrip

  committedMar 11, 2024
  3dcf276

• feat: rm unicycler Dockerfile and use latest biocontainer version

  marrip

  committedMar 11, 2024
  2458495

• feat: rm racon Dockerfile and use latest biocontainer version

  marrip

  committedMar 11, 2024
  c2623d1

• feat: rm quast Dockerfile and use latest biocontainer version

  marrip

  committedMar 11, 2024
  76923e0

• feat: rm prokka Dockerfile and use latest biocontainer version

  marrip

  committedMar 11, 2024
  c733ae5

• feat: rm mlst Dockerfile and use latest biocontainer version

  marrip

  committedMar 11, 2024
  da067e0

• feat: rm kraken Dockerfile and use latest biocontainer version

  marrip

  committedMar 11, 2024
  8b23a8b

• feat: rm kmerfinder Dockerfile and use latest biocontainer version

  marrip

  committedMar 11, 2024
  2e6e564

• feat: rm guppy

  marrip

  committedMar 11, 2024
  f4cf46d

• feat: rm flye Dockerfile and use latest biocontainer version

  marrip

  committedMar 11, 2024
  4e828fa

• feat: rm trimmomatic

  marrip

  committedMar 11, 2024
  1a09913

• feat: rm fastqc Dockerfile and use latest biocontainer version

  marrip

  committedMar 11, 2024
  da520d9

• feat: rm bowtie2 and minionqc

  marrip

  committedMar 11, 2024
  b82bd83

• feat: rm busco Dockerfile and use latest biocontainer version

  marrip

  committedMar 11, 2024
  ee8da58

• feat: rm abricate Dockerfile and use latest biocontainer version

  marrip

  committedMar 11, 2024
  c9073d9

Commits on Jul 10, 2020

• Feat: Updating pipe4C image base and include hg19 package

  marrip

  committedJul 10, 2020
  1d64983

Commits on Apr 15, 2020

• Fix: Use filename to extract VP name in pipe4C peak analysis

  marrip

  committedApr 15, 2020
  93d9dbd

Commits on Apr 7, 2020

• Feat: Add peak analysis script to pipe4C

  marrip

  committedApr 7, 2020
  958a8e4

Commits on Mar 16, 2020

• Feat: Added conf_generator.R to pipe4C

  marrip

  committedMar 16, 2020
  7ee948a

Commits on Mar 11, 2020

• Feat: Upgraded pipe4C to e03e8f6 commit

  marrip

  committedMar 11, 2020
  b887e7b

Commits on Mar 9, 2020

• Docs: Updating readme

  marrip

  committedMar 9, 2020
  dc96170

• Docs: updated readme

  marrip

  committedMar 9, 2020
  815751d

Commits on Feb 27, 2020

• Feat: Added Dockerfile for pipe4c

  marrip

  committedFeb 27, 2020
  991de7e

• Style: Removed deprecated tag

  marrip

  committedFeb 27, 2020
  031fef8

Commits on Feb 26, 2020

• Feat: Updated mlst to 2.19.0

  marrip

  committedFeb 26, 2020
  55cba6e

Commits on Feb 18, 2020

• Chore: Added Dockerfile for trimmomatic

  marrip

  committedFeb 18, 2020
  e76b222

• Feat: Using prokka 1.14.5

  marrip

  committedFeb 18, 2020
  294b3f2

• Feat: using conda to install prokka as cpan command failed

  marrip

  committedFeb 18, 2020
  7f31620

Commits on Jan 28, 2020

• CI: Added Dockerfile for bowtie2

  marrip

  committedJan 28, 2020
  2f13bac

• CI: Added Dockerfile for QUAST

  marrip

  committedJan 28, 2020
  77f80d4

Commits on Jan 7, 2020

• Fix: Fix spades

  marrip

  committedJan 7, 2020
  554bb30

Commits on Jan 6, 2020

• Docs: Updated README

  marrip

  committedJan 6, 2020
  1dbc694

• CI: Added Dockerfile for unicycler

  marrip

  committedJan 6, 2020
  3a36190

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