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5 stars written in Shell
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the pangenome graph builder

Shell 360 39 Updated Sep 28, 2024

MUM&Co is a simple bash script that uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation

Shell 64 14 Updated Jun 22, 2023

Useful bioinformatic scripts

Shell 50 53 Updated Feb 15, 2024

SRY: an effective method for sorting long-read of sex-limited (Y or W) chromosome.

Shell 18 5 Updated Aug 1, 2023

Set of script for the paper on the cattle graph genome

Shell 13 1 Updated Jan 10, 2023