General Functionality

The Atypic Cardio Analyzer is a Python library designed to analyze atypical cardiomyocyte action potential. It provides various functionalities such as:

• Reading .txt files containing time and voltage data.
• Preprocessing the data with Gaussian filtering.
• Identifying action potentials in the data.
• Calculating the maximum slope and voltage speed.
• Saving action potentials to .txt and .xlsx files.

Setting Up

Installation

To install the library, follow these steps:

1. Clone or download the repository from GitHub.
2. Navigate to the repository folder on your local machine.
3. Run the setup.bat file to install the library and its dependencies.

Dependencies

The library requires the following Python packages, which will be automatically installed when you run setup.bat:

• numpy
• pandas
• dask
• openpyxl
• scipy
• scikit-image

Authors

• Oleg Zakharov
• Aleksei Aredov
• Ilya Polusmak

For any queries, you can reach out to the authors at [email protected].