Miller is like awk, sed, cut, join, and sort for name-indexed data such as CSV, TSV, and tabular JSON

Parallel S3 and local filesystem execution tool.

Secure and simple terminal sharing

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV

Face-meltingly fast, thread-safe, marshalable, unionable, probability- and optimal-size-calculating Bloom filter in go

Accurate metagenomic profiling && Fast large-scale sequence/genome searching

LexicMap: efficient sequence alignment against millions of prokaryotic genomes

A versatile toolkit for k-mers with taxonomic information

Bioinformatic infrastructure libraries

BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale

Hosting conda packages in a private environment

Suite of tools for use in genome assembly and consensus. Work in progress.

Linked-Read Alignment Tool

A k-mer-based approach for masking low-complexity nucleotide sequences.