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Tools for working with genomic and high throughput sequencing data.

Scala 311 67 Updated Sep 23, 2024

QDNAseq bin annotation for hg38

R 14 5 Updated Aug 10, 2022

snakemake from fastq to annotated mutation calling using MUTECT2

R 2 Updated Jan 31, 2024

A SingleCell RNASeq pre-processing snakemake workflow

Python 147 47 Updated Jan 11, 2023